A mutually induced conformational fit underlies Ca2-directed interactions between calmodulin and the proximal C terminus of KCNQ4 K channels
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Calmodulin (CaM) conveys intracellular Ca2 signals to KCNQ (Kv7, “M-type”) K channels and many other ion channels. Whether this “calmodulation” involves a dramatic structural rearrangement or only slight perturbations of the CaM/ KCNQ complex is as yet unclear. A consensus structural model of conformational shifts occurring between low nanomolar and physiologically high intracellular [Ca2] is still under debate. Here, we used various techniques of biophysical chemical analyses to investigate the interactions between CaM and synthetic peptides corresponding to the A and B domains of the KCNQ4 subtype. We found that in the absence of CaM, the peptides are disordered, whereas Ca2/CaM imposed helical structure on both KCNQ A and B domains. Isothermal titration calorimetry revealed that Ca2/CaM has higher affinity for the B domain than for the A domain of KCNQ2– 4 and much higher affinity for the B domain when prebound with the A domain. X-ray crystallography confirmed that these discrete peptides spontaneously form a complex with Ca2/CaM, similar to previous reports of CaM binding KCNQ-AB domains that are linked together. Microscale thermophoresis and heteronuclear single-quantum coherence NMR spectroscopy indicated the C-lobe of Ca2-free CaM to interact with the KCNQ4 B domain (Kd 10 –20 M), with increasing Ca2 molar ratios shifting the CaM-B domain interactions via only the CaM C-lobe to also include the N-lobe. Our findings suggest that in response to increased Ca2, CaM undergoes lobe switching that imposes a dramatic mutually induced conformational fit to both the proximal C terminus of KCNQ4 channels and CaM, likely underlying Ca2-dependent regulation of KCNQ gating. © 2019 Archer et al.
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S10-OD021527; T32 HL007446; National Institutes of Health, NIH; U.S. Department of Energy, USDOE; National Heart, Lung, and Blood Institute, NHLBI: T32HL007446; NIH Office of the Director, OD: S10OD021527; National Cancer Institute, NCI: P30CA054174; National Institute of General Medical Sciences, NIGMS: P30GM124165; National Institute of Allergy and Infectious Diseases, NIAID: R01AI104476; National Institute of Neurological Disorders and Stroke, NINDS: F31NS090887, R01NS043394, R01NS065138, R01NS094461; Health Effects Institute, HEI; National Center for Advancing Translational Sciences, NCATS: UL1TR001120; Argonne National Laboratory, ANL: DE-AC02–06CH11357; Morris Stulsaft Foundation; Office of the Executive Vice President for Research and Partnerships, Purdue University, EVPRP Grant
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keywords
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Calmodulin; Cams; Chemical analysis; Conformations; Molar ratio; Nuclear magnetic resonance spectroscopy; Peptides; Physiological models; Quantum theory; Conformational shifts; Helical structures; Heteronuclear single-quantum coherences; Intracellular Ca; Isothermal titration calorimetry; Structural modeling; Structural rearrangement; Synthetic peptide; X ray crystallography; calcium ion; calmodulin; potassium channel KCNQ4; calcium; calmodulin; KCNQ4 protein, human; potassium channel KCNQ; Article; binding affinity; carboxy terminal sequence; chemical analysis; circular dichroism; complex formation; controlled study; heteronuclear single quantum coherence; isothermal titration calorimetry; microscale thermophoresis; priority journal; protein conformation; protein domain; protein protein interaction; X ray crystallography; animal; channel gating; chemistry; CHO cell line; Cricetulus; genetics; human; metabolism; protein secondary structure; Animals; Calcium; Calmodulin; CHO Cells; Cricetulus; Crystallography, X-Ray; Humans; Ion Channel Gating; KCNQ Potassium Channels; Protein Domains; Protein Structure, Secondary
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