Packaging of genomic RNA in positive-sense single-stranded RNA viruses: A complex story
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The packaging of genomic RNA in positive-sense single-stranded RNA viruses is a key part of the viral infectious cycle, yet this step is not fully understood. Unlike double-stranded DNA and RNA viruses, this process is coupled with nucleocapsid assembly. The specificity of RNA packaging depends on multiple factors: (i) one or more packaging signals, (ii) RNA replication, (iii) translation, (iv) viral factories, and (v) the physical properties of the RNA. The relative contribution of each of these factors to packaging specificity is different for every virus. In vitro and in vivo data show that there are different packaging mechanisms that control selective packaging of the genomic RNA during nucleocapsid assembly. The goals of this article are to explain some of the key experiments that support the contribution of these factors to packaging selectivity and to draw a general scenario that could help us move towards a better understanding of this step of the viral infectious cycle. © 2019 by the author.
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(+)ssRNA viruses; Packaging signals; RNA packaging; RNA replication; Virion assembly genomic RNA; capsid protein; virus RNA; antiviral activity; antiviral therapy; binding affinity; binding assay; biological activity; cell aggregation; cell compartmentalization; cell culture; defense mechanism; enzyme activity; gene location; gene mutation; gene segregation; genetic linkage; genome size; human; molecular dynamics; molecular mechanics; nanomedicine; nonhuman; protein interaction; protein structure; Review; RNA conformation; rna packaging; RNA replication; RNA sequence; RNA structure; RNA translation; signal transduction; single-stranded RNA virus; virus particle; genetics; RNA virus; virion; virus assembly; virus genome; virus nucleocapsid; Capsid Proteins; Genome, Viral; Nucleocapsid; RNA Viruses; RNA, Viral; Virion; Virus Assembly
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